BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011H01SP1|AL426274
(800 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1739 1564 0.0
>3x_Contig1739
Length = 22061
Score = 1564 bits (787), Expect = 0.0
Identities = 795/800 (99%)
Strand = Plus / Minus
Query: 1 gatccagcnagaagataatatcttgaatatagattcgggacaatcaaatcattgaattgt 60
|||||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3306 gatccagctagaagagaatatcttgaatatagattcgggacaatcaaatcattgaattgt 3247
Query: 61 tataactacaagcttggtaaaatwccctactacatttggttgggttgcaataaagaccac 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3246 tataactacaagcttggtaaaattccctactacatttggttgggttgcaataaagaccac 3187
Query: 121 gaacaacatcttcaagctagatttgttgaacttgcaccaacatctccatacctcgcacct 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3186 gaacaacatcttcaagctagatttgttgaacttgcaccaacatctccatacctcgcacct 3127
Query: 181 ataaccacgtcagcttcctctaacgctcagccaatgaccaaagctatgattgcagcacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3126 ataaccacgtcagcttcctctaacgctcagccaatgaccaaagctatgattgcagcacta 3067
Query: 241 gaaaattctaaaaaaggtttaccatatccttctctgttctatcaaaaggagcattggaga 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3066 gaaaattctaaaaaaggtttaccatatccttctctgttctatcaaaaggagcattggaga 3007
Query: 301 gtgtactatgatgaagtgaaccctgagtacagccaatttaagaacagttatatatacgca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3006 gtgtactatgatgaagtgaaccctgagtacagccaatttaagaacagttatatatacgca 2947
Query: 361 ttcacatgggaagatcctagagaagatgttaacattcttaatattcaaccagaagatacc 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2946 ttcacatgggaagatcctagagaagatgttaacattcttaatattcaaccagaagatacc 2887
Query: 421 attttggctattaccagtgctggtgataatattttgcactatgccactttgcctaatcca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2886 attttggctattaccagtgctggtgataatattttgcactatgccactttgcctaatcca 2827
Query: 481 ccgaagagaattcatggggtggatttaaatccatgtcaaggacatttgacagaattaava 540
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 2826 ccgaagagaattcatggggtggatttaaatccatgtcaaggacatttgacagaattaaaa 2767
Query: 541 ttagcagcgattagaagcttgagtttcacacagttgtggcaaatgtttggtgaaggtaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2766 ttagcagcgattagaagcttgagtttcacacagttgtggcaaatgtttggtgaaggtaag 2707
Query: 601 attgatagattcaacaatattttactgaataavttggcgccatatctttcatcaaacgca 660
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 2706 attgatagattcaacaatattttactgaataaattggcgccatatctttcatcaaacgca 2647
Query: 661 tttcaatactggttcgaaaatggaacgaaaacatttgatcctaatggagccgggttgtat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2646 tttcaatactggttcgaaaatggaacgaaaacatttgatcctaatggagccgggttgtat 2587
Query: 721 gacactgggttcacaaagtgggcattaagacttgcaaaatgggtattcaaagttgcaaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2586 gacactgggttcacaaagtgggcattaagacttgcaaaatgggtattcaaagttgcaaat 2527
Query: 781 cttacagatgaagttaatat 800
||||||||||||||||||||
Sbjct: 2526 cttacagatgaagttaatat 2507
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5999
Number of Sequences: 1807
Number of extensions: 5999
Number of successful extensions: 37
Number of sequences better than 1.0e-20: 1
length of query: 800
length of database: 10,358,551
effective HSP length: 16
effective length of query: 784
effective length of database: 10,329,639
effective search space: 8098436976
effective search space used: 8098436976
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)